Any time you brush paint one color/clear coat over another, not only is the paint much wetter when it goes on the surface than it would be with an airbrush, but you're also moving it around with the brush. The combination of the wetter paint (which will still have very active solvents in it) and the movement from the brush will start removing the paint underneath. This is going to be true of almost any combination of paints. Its always best to apply clear coats with either an airbrush, or out of a rattle can. If you absolutely have to brush a clear coat on for some reason, use something that is water-based.