I use Future as a gloss coat, and I use Tamiya acrylics, as well as several brands of water-based acrylics. I have never, ever had Future attack the color coat.
There are some details no one asked, that might also be important to troubleshooting this.
Did you prime the piece before you applied the Tamiya color coat?
How did you apply the Tamiya, with an airbrush or by hand-brushing? Did you thin it, and if you did, what did you use?
I ask these questions because of my own experience with Tamiya acrylics. I always lay them down over a primer, because I found they didn't adhere well, to plastic or to white metal, without a primer.
Also, I went many years brushing Tamiya acrylics on metal figures by hand, and I often saw a second coat lift the first coat off the subject, even though the first coat appeared to be dry. It was the worst with Flat Black and Flat White.
Then I read somewhere that Tamiya's acrylics are formulated for airbrushing and are meant to be thinned. After trial and error with different thinners, I found that if I used Tamiya's proprietary acrylic thinner, I could lay down coats as thin as if I had airbrushed them, and there was no problem laying down a second coat over them. They definitely cured better for me that way.
And I apply Future to a model by brushing. It's easier for me to do this, than to fire up the airbrush to do it. Though I've applied it with an airbrush, too. Like I said, I have never, ever seen Future re-activate a color coat, whether it's Tamiya's acrylic, or Andrea, Vallejo, or the craft-store, water-based acrylics that I also use.
I suspect that your Tamiya color hadn't completely cured, even if it looked dry. I would try Future again, though if you've decided not to use it anymore, there are also gloss products out there that are made by hobby suppliers specifically for scale modelers to use. You might want to try those, too.
And if you do decide not to use Future anymore, don't throw it out - that's wasteful. Use it on your floors.
You might find more feedback and insight about using Future in the Paint forum, too. It's a little further down the index page. Though I don't recall anyone reporting this particular problem.