Mrchntmarine
...Im gonna try a little windex but i dont think that will remove the glue. Nail polish remover?
Windex will remove the Future from the piece, back down to the bare styrene. It won't help with the damaged areas.
And I don't think nail polish remover, whose active ingredient is the solvent acetone, is going to make this better, either.
Tamiya extra thin is a glue designed for gluing styrene pieces together by dissolving them, then the cement cures and the pieces are welded together. It's not like it's a layer that can be peeled off (which is what white glue does-it surrounds the mating edges and cures to hold them in place, it doesn't react chemically with the material).
I think you're going to need to sand and polish out the clear areas melted by the thin glue. It's not a disaster-most of us have had to do the same or similar thing at one time or another, to clean a piece of clear styrene.
As far as the glue goes, I also use Tamiya Extra Thin, along with some other brands of liquid styrene cement, for most assemblies on a styrene kit. I don't often use it for attaching clear parts, though. I use white glue (Elmer's) as others have mentioned, or MicroScale's Kristal Klear, but I also will use old-fashioned Testor's styrene glue in a tube. I apply it to the mating surfaces with a toothpick, and its slower curing time gives me time to make adjustments.
Hope that helps!