I have experienced very annoying hull parts seam separation problems when the kit parts' fit isn't good. This is especially a problem when the hull seam is along the waterline. 1/350 Trumpeter kits have this problem, 1/350 Tamiya kits do not because their hulls are molded in one piece (except Enterprise CVN-65).
For example, on a 1/350 Trumpeter Yorktown CV-10 I am building, the upper hull parts do not fit well with the lower. So, when the upper hull parts are fixed to the lower, the seam is under internal pressure. Any handling or pulling of tape after painting tends to pop open the seam spoiling the finish. It's happened four times and is really tough to repair properly.
What I should have done was reinforced the hull while I had access to the hull interior after joining the upper to the lower but before fixing the hangar deck. At the time during the build process I failed to anticipate how often and how severe the seam pops were going to occur so I felt no reinforcement was needed. Now that the kit is largely done, it's too late to reinforce the hull and seam pops will likely continue. Doh.