With clear parts, it's better to cut the sprue a little further from the part and then file/sand the nub flush and polish if required.
The clear styrene used to mould these parts lack the fillers and plasticisers that are used in the "normal" parts. As a result, they are less flexible and far more brittle and are prone to cracking and crazing.
If you clip the sprue too close to a clear part, you risk the propogation of cracks or stress lines into the part or the very real possibility of taking an unintended chunk out of the part.