I wouldn't use CA to glue a fuselage together. I use a liquid “welding” glues by Testors, but others glues that are similar are Ambroid Pro Weld, and Tenax.
What they do is actually melt the plastic together. When you squeeze the fuselage halves together a little bit of the melted plastic oozes out and forms a bead along the seam. When it dries, you sand down or scrape that bead of plastic and there's no seam. Squadron offers a seam scraping tool for just this purpose.
But, even with care and good technique (something I often lack) seams don't turn out perfectly, that's where putty and gap-filling CA glue come in.
Check out these two articles that really helped me:
Beginner's guide to fuselage assembling by Steve Wilder
http://s96920072.onlinehome.us/tnt1/001-100/TNT068_gluing_Wilder/tnt068.htm
This article covers the whole thing from start to finish. It has good photos too.
Seam Putty Techniques by Matt Swan (our very own Swanny)
http://www.swannysmodels.com/Seams.html
This article explains how to fix seams with putty. This technique really helped me take care of a particularly nasty seam earlier this week.
There's a little overlap between the articles, but taken together, they pretty much cover the whole topic.
Regards,