I think you're referring to the edges where the door meets the body panels and the hood meets the fenders, etc. There's a couple of ways to do it:
1. Some people use a small permanent marker and just draw them in.
2. Others make a 'wash' out of paint that won't harm the main body color and just flood the grooves with paint. Let it dry a bit, then buff off the excess with a soft cloth. You might need to dip a small corner of the cloth into the appropriate thinner to remove the excess.
Hope that makes sense. One suggestion though... instead of using 'black' for the panel lines, try using a very dark version of the body color. Black has just so much contrast and can make the whole thing look a little 'toyish'. A dark version of the body color will still give contrast, but not be so harsh. For light colored cars like white or yellow, a medium-dark gray would be better than black.
Use your judgement and build it the way you like...
Murray