I wouldn't worry too much about priming in a case like that. Even for PE parts, priming is not really necessary. While it is true that paint-primer-PE may be a more rugged finish than paint directly on PE, it's not as though your delicate PE parts inside the cockpit are subject to a lot of handling.
The main exception would be if your final color is one that does not cover well, you may well be better off to base coat, prime if you will, with a light color. In that case it's better to have two coats of paint, basecoat + colorcoat, than to have several color coats. The only color I have a problem with are yellows, so I'll always basecoat with flat white prior to painting yellow. Some zinc chromate greens are rather yellow, so they may not cover well either. Just see how it goes.