I suppose having that glossy finish in fact gives you more benefits. That way the decals will cling to the surface better. You can thereafter spray the model with a flat coat.
Gloss paints will usually result in a glossy (or at least semi-gloss) finish regardless of the amount of thinner you put in. If you want to spray on a flat finish right away, you can add a flat base, if one is available in the brand youre using, and mix the same to the paint before spraying. Be careful, though, as too much flat base will give you a "snowed" finish (apparently, the dissolved flat base re-crystalizes after drying and leaves white-colored accumulations). Try spraying the mixture on a old model first and see how it dries up.
Hope this helps.